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020 |a 981270485X  |q (electronic bk.) 
020 |a 9789812704856  |q (electronic bk.) 
040 |a N$T  |b eng  |e pn 
050 4 |a QH323.5  |b .P33 2004eb 
111 2 |a Pacific Symposium on Biocomputing  |c Hawaii Island, Hawaii)  |d 2004 : 
240 1 0 |a Biocomputing 2004 
245 1 0 |a Pacific Symposium on Biocomputing 2004 :  |b Hawaii, USA, 6-10 January 2004 /  |c edited by Russ B. Altman [and others]. 
246 3 0 |a Biocomputing 2004 
260 |a Singapore ;  |b World Scientific,  |c ©2003.  |a River Edge, NJ : 
300 |a 1 online resource (xvi, 592 pages) :  |b illustrations 
504 |a Includes bibliographical references. 
505 0 |a Alternative splicing. Session introduction / H. Wang and C. Lee -- Design of a high-throughput assay for alternative splicing using polymerase colonies / J.D. Buhler [and others] -- The effects of alternative splicing on transmembrane proteins in the mouse genome / M.S. Cline [and others] -- Genome-wide detection of alternative splicing in expressed sequences using partial order multiple sequence alignment graphs / C. Grasso [and others] -- Detection of novel splice forms in human and mouse using cross-species approach / Z. Kan [and others] -- Extensive search for discriminative features of alternative splicing / H. Sakai and O. Maruyama -- Transcriptome and genome conservation of alternative splicing events in humans and mice / C.W. Sugnet [and others] -- A database designed to computationally aid an experimental approach to alternative splicing / C.L. Zheng [and others] -- Computational tools for complex trait gene mapping. Session Introduction / F. de la Vega, K.K. Kidd, and A. Collins -- Pedigree generation for analysis of genetic linkage and association / M.P. Bass, E.R. Martin, and E.R. Hauser -- A Markov chain approach to reconstruction of long haplotypes / L. Eronen, F. Geerts, and H. Toivonen -- Tradeoff between no-call reduction in genotyping error rate and loss of sample size for genetic case/control association studies / S.J. Kang [and others] -- A comparison of different strategies for computing confidence intervals of the linkage disequilibrium measure D' / S.K. Kim, K. Zhang, and F. Sun -- Multiplexing schemes for generic SNP genotyping assays / R. Sharan, A. Ben-Dor and Z. Yakhini -- Haplotype block definition and its application / X. Zhu [and others] -- Biomedical ontologies. Session introduction / O. Bodenreidel, J.A. Mitchell, and A.T. McCray -- Part-of relations in anatomy ontologies: a proposal for RDFS and OWL formalisations / J.S. Aitken, B.L. Webber, and J.B.L. Bard -- Building mouse phenotype ontologies / G.V. Gkoutos [and others] -- An evidence ontology for use in pathway/genome databases / P.D. Karp [and others] -- Terminological mapping for high throughput comparative biology of phenotypes / Y.A. Lussier and J. Li -- The compositional structure of gene ontology terms / P.V. Ogren [and others] -- Defaults, context, and knowledge: alternatives for OWL-indexed knowledge bases / A. Rector -- Biological nomenclatures: a source of lexical knowledge and ambiguity / O. Tuason [and others] -- Investigating implicit knowledge in ontologies with application to the anatomical domain / S. Zhang and O. Bodenreider -- Joint learning from multiple types of genomic data. Session introduction / A. Hartemink and E. Segal -- ProGreSS: simultaneous searching of protein databases by sequence and structure / A. Bhattacharya [and others] -- Predicting the operon structure of bacillus subtilis using operon length, intergene distance, and gene expression information / M.J.L. De Hoon [and others]. 
505 8 |a Combining text mining and sequence analysis to discover protein functional regions / E. Eskin and E. Agichtein -- Kernel-based data fusion and its application to protein function prediction in yeast / G.R.G. Lanckriet [and others] -- Discovery of binding motif pairs from protein complex structural data and protein interaction sequence data / H. Li [and others] -- Phylogenetic motif detection by expectation-maximization on evolutionary mixtures / A.M. Moses, D.Y. Chiang, and M.B. Eisen -- Using protein-protein interactions for refining gene networks estimated from microarray data by Bayesian networks / N. Nariai [and others] -- Motif discovery in heterogeneous sequence data / A. Prakash [and others] -- Negative information for motif discovery / K.T. Takusagawa and D.K. Gifford -- Informatics approaches in structural genomics. Session introduction / S.D. Mooney, P.E. Bourne, and P.C. Babbitt -- The status of structural genomics defined through the analysis of current targets and structures / P.E. Bourne [and others] -- Protein structure and fold prediction using tree-augmented naïve Bayesian classifier / A. Chinnasamy, W.-K. Sung, and A. Mittal -- Clustering protein sequence and structure space with infinite Gaussian mixture models / A. Dubey [and others] -- Accurate classification of protein structural families using coherent subgraph analysis / J. Huan [and others] -- Identifying good predictions of RNA secondary structure / M.E. Nebelss -- Exploring bias in the protein data bank using contrast classifiers / K. Peng, Z. Obradovic, and S. Vucetic -- Geometric analysis of cross-linkability for protein fold discrimination / S. Potluri [and others] -- Protein fold recognition through application of residual dipolar coupling data / Y. Qu [and others] -- Computational and symbolic systems biology. Session introduction / T. Ideker; E. Neumann, and V. Schachter -- A mixed integer linear programming (MILP) framework for inferring time delay in gene regulatory networks / M.S. Dasika, A. Gupta, and C.D. Maranas -- Robust identification of large genetic networks / D. Di Bernardo, T.S. Gardner, and J.J. Collins -- Reconstructing chain functions in genetic networks / I. Gat-Viks [and others] -- Inferring gene regulatory networks from raw data -- a molecular epistemics approach / D.A. Kightley, N. Chandra, and K. Elliston -- A Biospi model of lymphocyte-endothelial interactions in inflamed brain venules / P. Lecca [and others] -- Modeling cellular processes with variational Bayesian cooperative vector quantizer / X. Lu, M. Hauskrecht, and R.S. Day -- Symbolic inference of xenobiotic metabolism / D.C. McShan, M. Updadhayaya, and I. Shah -- Finding optimal models for small gene networks / S. Ott, S. Imoto, and S. Miyano -- Pathway logic modeling of protein functional domains in signal transduction / C. Talcott [and others] -- Modeling gene expression from microarray expression data with state-space equations / F.X. Wu, W.J. Zhang, and A.J. Kusalik. 
650 0 |a Biology  |x Mathematical models 
650 0 |a Biology  |x Computer simulation 
650 0 |a Molecular biology  |x Mathematical models 
650 0 |a Molecular biology  |x Computer simulation 
650 7 |a NATURE  |x Reference. 
650 7 |a SCIENCE  |x Life Sciences  |x General. 
650 7 |a SCIENCE  |x Life Sciences  |x Biology. 
650 7 |a Biology  |x Computer simulation. 
650 7 |a Biology  |x Mathematical models. 
650 7 |a Molecular biology  |x Computer simulation. 
650 7 |a Molecular biology  |x Mathematical models. 
700 1 |a Altman, Russ. 
856 4 0 |u http://search.ebscohost.com/login.aspx?direct=true&scope=site&db=nlebk&AN=174558 
952 |a CY-NiOUC  |b 5a04667c6c5ad14ac1eeef5f  |c 998a  |d 945l  |e -  |t 1  |x m  |z Books